Biomedical-Knowledge-Graph

Information extraction from unstructured text to build a knowledge graph using techniques from traditional NLP to pre-trained transformers and LLMs for NER and Linking, and Relation Extraction. Maintained by alisonmitchell on GitHub, where it has earned 16 stars from the community.

It's actively developed around arxiv, bern2, bertopic, and is a solid reference for anyone building with these tools.